DNA Phosphoramidites
5'-O-DMTr-5-[(naphthalen-1-ylmethyl)carbamoyl]-dU-3'-CE-Phosphoramidite
Quick view. A 5'-O-DMTr-protected Nap-dU 3'-CE phosphoramidite identified by CAS 2133842-85-8. The CAS-controlled structure contains a 1-naphthalenylmethyl carbamoyl substituent; the phosphorus center is not assigned as a single Rp or Sp configuration. CAS 2133842-85-8. Catalog target purity: By inquiry. Availability: Inquiry only — contact OROGO to confirm current availability.
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![Chemical structure of 5'-O-DMTr-5-[(naphthalen-1-ylmethyl)carbamoyl]-dU-3'-CE-Phosphoramidite](/structures/67d3e22fa2cef269.svg)
Product profile
5'-O-DMTr-5-[(naphthalen-1-ylmethyl)carbamoyl]-dU-3'-CE-Phosphoramidite is classified as dna phosphoramidites (Formula C51H56N5O9P; molecular weight 914.01).
5'-O-DMTr-5-[(naphthalen-1-ylmethyl)carbamoyl]-dU-3'-CE-Phosphoramidite is supplied for research use within the DNA Phosphoramidites product family.
For 5'-O-DMTr-5-[(naphthalen-1-ylmethyl)carbamoyl]-dU-3'-CE-Phosphoramidite, confirm the current specification, storage conditions and downstream-method compatibility before routine use.
Names and search terms
Confirmed or normalized name variants
- Nap dU amidite
- 5'-O-DMTr-Nap-dU-3'-CE Phosphoramidite
Useful catalog search terms
- CAS 2133842-85-8
Physicochemical data
| InChIKey | WAQZWDAZYFQSHE-CNYVYYQHSA-N |
|---|---|
| Stereochemistry | Sugar stereochemistry controlled; phosphorus center unspecified |
| InChI | InChI=1S/C51H56N5O9P/c1-34(2)56(35(3)4)66(63-29-13-28-52)65-45-30-47(55-32-44(49(58)54-50(55)59)48(57)53-31-37-16-12-15-36-14-10-11-19-43(36)37)64-46(45)33-62-51(38-17-8-7-9-18-38,39-20-24-41(60-5)25-21-39)40-22-26-42(61-6)27-23-40/h7-12,14-27,32,34-35,45-47H,13,29-31,33H2,1-6H3,(H,53,57)(H,54,58,59)/t45-,46+,47+,66?/m0/s1 |
| SMILES | CC(C)N(C(C)C)P(OCCC#N)O[C@H]1C[C@@H](O[C@@H]1COC(C2=CC=CC=C2)(C3=CC=C(C=C3)OC)C4=CC=C(C=C4)OC)N5C=C(C(=O)NC5=O)C(=O)NCC6=CC=CC7=CC=CC=C76 |
| Canonical SMILES | CC(C)N(C(C)C)P(OCCC#N)O[C@H]1C[C@@H](O[C@@H]1COC(C2=CC=CC=C2)(C3=CC=C(C=C3)OC)C4=CC=C(C=C4)OC)N5C=C(C(=O)NC5=O)C(=O)NCC6=CC=CC7=CC=CC=C76 |
| PubChem CID | 176129001 |
| Structure representation | Unsaturated 5-substituted dU phosphoramidite with three assigned deoxyribose stereocentres and phosphorus configuration left unspecified |
Release documentation
The current specification defines the analytical method and acceptance criteria; the released lot result is reported on the CoA.
Additional HPLC, MS or NMR documentation can be agreed during technical review where available.
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Product-family literature
These publications provide peer-reviewed context for the DNA Phosphoramidites product family and its named chemistry. They are background reading only, not evidence for the exact product, supplied form, lot specification, availability or performance.
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